PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00001565.1.g00004.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family WRKY
Protein Properties Length: 140aa    MW: 15776.6 Da    PI: 10.2134
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00001565.1.g00004.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY40.17.5e-13111134124
                                     ---SS-EEEEEEE--TT-SS-EEE CS
                            WRKY   1 ldDgynWrKYGqKevkgsefprsY 24 
                                     ldDgy+WrKYGqK vk+++fprs 
  FANhyb_rscf00001565.1.g00004.1 111 LDDGYRWRKYGQKAVKNNKFPRSV 134
                                     59********************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-1396134IPR003657WRKY domain
SuperFamilySSF1182901.44E-10103133IPR003657WRKY domain
PROSITE profilePS5081113.907106140IPR003657WRKY domain
SMARTSM007744.8E-4111140IPR003657WRKY domain
PfamPF031061.4E-8112134IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MDTYPAFYSS SSTPPSAAAS SLSLNMVNTH PHHAYSNDHQ YQASNNKANG FLGLMSEMEV  60
SNSMSSITQQ SMKSFGEGES NTAVRLGMKK GDKKIRKPRY AFQTRSQVDI LDDGYRWRKY  120
GQKAVKNNKF PRSVHHDYKS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004310100.14e-85PREDICTED: probable WRKY transcription factor 75
TrEMBLC7S8113e-84C7S811_FRAAN; WRKY DNA binding protein
STRINGPOPTR_0001s13600.17e-33(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF115634110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.17e-21WRKY DNA-binding protein 75